Insertion junction: CLIP2.050756_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050756
Chromosome:chromosome 16
Location:4488177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGCCACATGGCTTGCTCAATGCTCGCAATGTAGAAGAGAATCTAGT
Internal bar code:TTGTTATTCTAAGACGGTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGGGGGTAAGGAGCTG
Suggested primer 2:GTTTGTGGCCTTGCAGTCTG