Insertion junction: CLIP2.050771_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050771
Chromosome:chromosome 14
Location:1544530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618000 EFH9 EF-hand Calcium binding protein; (1 of 5) PTHR23050:SF90 - CENTRIN-3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAACGACTAGGCCCTGCTCCACTCCGGCACGCAGAACCCCACGGACGA
Internal bar code:TTCACCTCCTGTTTAAGTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1314
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGTTTGAGAATCTCGTC
Suggested primer 2:GAACCGTCGACTGTGAGTGT