Insertion junction: CLIP2.050781_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050781
Chromosome:chromosome 6
Location:5493587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286350 UMM6 UbiE/COQ5 methyltransferase family protein; (1 of 2) PTHR10108//PTHR10108:SF830 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCGTCGGCACCAACGACAACGGCAGCCCCGCCGGCTCGGACACGACC
Internal bar code:AGTACGCTTTTGGTTCGGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:59.375
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGACGAAGAAGCTCA
Suggested primer 2:GCCCTCTTGCAAGTATGGGT