Insertion junction: CLIP2.050783_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050783
Chromosome:chromosome 11
Location:3599555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478128 GCN20 Soluble ABC-F domain-containing protein related to GCN20; (1 of 1) K06158 - ATP-binding cassette, subfamily F, member 3 (ABCF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTCTCGCTCGCCCTTACACAGGGCAACTACAGCACCTTTGAGAAGAC
Internal bar code:GATGAGCGTGGTATGCGACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:32.8358
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTTTTGCGTGCGTGTG
Suggested primer 2:CTAGAGGGTGCGTGTGTTGT