Insertion junction: CLIP2.050789_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050789
Chromosome:chromosome 16
Location:792714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690700 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like intron
Cre16.g690750 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCTGCAAGCTATAGGATGCACGTCAAGGCGGCTCGCCAAGCCACCAT
Internal bar code:TTAGAAAGGTCAAACAGGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3546
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCCGCAACAAGTTCAAG
Suggested primer 2:GTGGTGTAGTGTGGATGGGG