Insertion junction: CLIP2.050790_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050790
Chromosome:chromosome 9
Location:1499789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGGAGGACCTGCGCAAGAACGGGCTGGAGAGCTCGAACCTCATTGT
Internal bar code:TGGGGGGTTATGAGTCGACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACATCAACGGCTAACCC
Suggested primer 2:GCCAAGTCAACACCGGAAAC