Insertion junction: CLIP2.050790_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050790
Chromosome:chromosome 9
Location:1499790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTCCAGAGAGGCGTAGTGGTCGGCGATGGCCCTATGCATGTGTGAG
Internal bar code:TGACTATGTGCGCCCGAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4858
LEAP-Seq percent confirming:11.4754
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGTCAACACCGGAAAC
Suggested primer 2:TCCACATCAACGGCTAACCC