Insertion junction: CLIP2.050791_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050791
Chromosome:chromosome 5
Location:2548856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGAACTTTCTTATTGAACTCGCTACGCAGCGTGCGCAGTTCCGTCAG
Internal bar code:TCCGAATGTCCGGAACATCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTAATTGCGAGGCGAAG
Suggested primer 2:CCATGACGACTGATGCTGGT