Insertion junction: CLIP2.050800_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050800
Chromosome:chromosome 9
Location:886677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403400 (1 of 3) PF13637//PF13920 - Ankyrin repeats (many copies) (Ank_4) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCAAGTGGAGGAGGCGGTGGCGGCAGCGGAAGACGCCGAGGAGGA
Internal bar code:AGCGGGGCTTCCCATTTTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4681
LEAP-Seq percent confirming:95.8763
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGTTGGTCCGGAAACAC
Suggested primer 2:GCGTGTTAGCATTGCGCATA