Insertion junction: CLIP2.050803_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050803
Chromosome:chromosome 12
Location:2812590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503600 Leucine-Rich Repeat Protein; (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGAGGGGTGGTGGTGTTGGCGTGCGGGAACGGGTTGGGGTGTTGGGT
Internal bar code:TGCCATTGGAATTCGTGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCACGCTTTCTGTTTGC
Suggested primer 2:CTTCAACCTCCACCCTCCAC