Insertion junction: CLIP2.050808_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050808
Chromosome:chromosome 15
Location:1453301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g641750 (1 of 3) PF05495 - CHY zinc finger (zf-CHY) CDS
lncRNA_TCONS_00236644 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATCGTGCCGACGTCATAGTGATCCGAAACCGCCGAGGGCGGATCCA
Internal bar code:GGAAGGCCACGTGGTACATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCACTTGCAGAGAGACG
Suggested primer 2:ATCCTCACTCTGGTACGGCT