Insertion junction: CLIP2.050812_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050812
Chromosome:chromosome 1
Location:2670848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016100 (1 of 7) IPR011048 - Cytochrome cd1-nitrite reductase-like, haem d1 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACAGGTTGGTCGCTGTGCCGCCACCCGAATTGATGAACCTGCAAGTG
Internal bar code:AAAATAGATATACTATGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1278
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCACGCACGGTATCGAT
Suggested primer 2:ACATGGGCAATCAAGGGGAG