Insertion junction: CLIP2.050818_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050818
Chromosome:chromosome 9
Location:3555350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396587 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAGTAATACACACCTCCACGATTTCCCCCACGACCCGCTGTCGACGC
Internal bar code:TCAGTGCGTAAAGGGGATAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGGCTTGTGTTCCTCC
Suggested primer 2:CCTGGTTGATGTCCTTCGCT