Insertion junction: CLIP2.050820_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050820
Chromosome:chromosome 13
Location:112107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562550 ARH1 (1 of 1) 1.18.1.6 - Adrenodoxin-NADP(+) reductase / Nicotinamide adenine dinucleotide phosphate-adrenodoxin reductase; NADP adrenodoxin-like ferredoxin reductase intron
lncRNA_TCONS_00017110 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGAAAAGCGCGAGGACGGTACGGCGCCCCCTCCCCCGGTCCCCTTGC
Internal bar code:ATAATTTGGTAGATAGAACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:314
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCGCATGAACAAGCACTA
Suggested primer 2:ATGACTCCTCGCACGTTGTT