Insertion junction: CLIP2.050824_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050824
Chromosome:chromosome 4
Location:2283205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGAGACTGGTACTTAAGGAGTCTTGTTGAGATTGACTCCTATGATTGC
Internal bar code:TGTGTGTACTTTCTCGCGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAAGGAATCGCTGGTGG
Suggested primer 2:CGAAGGTTGTGTGGGGATGA