Insertion junction: CLIP2.050825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050825
Chromosome:chromosome 12
Location:1896349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATAAGCAAACAGAAGCGCTGCAAGGAGAAGCTGCAGCCGCATATGCG
Internal bar code:CCAGGACCATCCTGAGCTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4274
LEAP-Seq percent confirming:95.5224
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCTCTCACCACAAACG
Suggested primer 2:GTGTCGCAAGGGAAGAGGAA