Insertion junction: CLIP2.050825_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050825
Chromosome:chromosome 12
Location:1896360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAACCCCCACTTACCCGCAGGCTGGGACGACAGCTCGCCCTGCAGCGG
Internal bar code:ATCTTATGAAGTGGTAACTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCGCAAGGGAAGAGGAA
Suggested primer 2:AGCCTCTCTCACCACAAACG