Insertion junction: CLIP2.050828_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050828
Chromosome:chromosome 12
Location:8804993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546900 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAACGCCAGCAGCAGCGCAGGCGCAGCCAACACCAGTGGCGTCATTGC
Internal bar code:TGTGCGATATAAGGGTAGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:118
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:118

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCGCGAAAACACCTTTC
Suggested primer 2:TAAGAGGTAGGGGGACTGGC