Insertion junction: CLIP2.050829_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050829
Chromosome:chromosome 12
Location:8584770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548650 BBS4 (1 of 1) K16531 - Bardet-Biedl syndrome 4 protein (BBS4); Bardet Biedl syndrome-4 associated protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACAACAAGGGGCTGTGCTACATGTACCTCAAGCAGTACGACAGGTGC
Internal bar code:GAATGAGCGGCAGGTCCAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGTGTACCAGTGACGG
Suggested primer 2:GGGAGGGTTTGGGAGTGATG