Insertion junction: CLIP2.050838_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050838
Chromosome:chromosome 2
Location:7362821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391875 (1 of 1) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTATGCCTGAGAGGGTGTATTGGGTGCTGCAACACCCCGGGTCTTAC
Internal bar code:TGTAAGGCAGTCATGTTCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1988
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACTACGGTTTCCACGGT
Suggested primer 2:ACTTAAGCATATCCCCGCCG