Insertion junction: CLIP2.050840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050840
Chromosome:chromosome 2
Location:3949281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102300 (1 of 1) PTHR31013 - THAUMATIN FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATCTAAGTATCCAATGCCTCGCAGTGGGGAAGCCTTGCAGGATCGT
Internal bar code:GGCACTATGAAACACGGTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:6442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGTCAGGCCTGTAAAAT
Suggested primer 2:TAAGCGTGTTTGCAAGGTGC