Insertion junction: CLIP2.050845_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050845
Chromosome:chromosome 7
Location:4549542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344000 (1 of 1) PTHR31988:SF1 - 9-O-ACETYL-N-ACETYLNEURAMINIC ACID DEACETYLASE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAGGGAAATGCAGGGCGCAACCTCTGCTGGCCCCTCCTTCTTTGGCT
Internal bar code:TTAGTACTATTTAACCGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAAGCTTTGCCCATGTG
Suggested primer 2:AGCCTGCGTGTTACATTCGA