Insertion junction: CLIP2.050845_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050845
Chromosome:chromosome 7
Location:4550488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344000 (1 of 1) PTHR31988:SF1 - 9-O-ACETYL-N-ACETYLNEURAMINIC ACID DEACETYLASE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCTTATGACAGCATGAGCGTTTGTGCAGTTGCATGAATTGTCCCGA
Internal bar code:CTGCTTATGTATATAAGGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTGCGTGTTACATTCGA
Suggested primer 2:GACCAAGCTTTGCCCATGTG