Insertion junction: CLIP2.050867_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050867
Chromosome:chromosome 3
Location:4170256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173165 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGACGGCGACGGCCCCTCGGCGCGCCTGTCCCTCATGGCGTGGCAGA
Internal bar code:TGGGTCCCGTTCAGGGCACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2110
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCTGTGAGCAATGTCGT
Suggested primer 2:TTGCGCTTCTTTTGCACCTC