Insertion junction: CLIP2.050874_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050874
Chromosome:chromosome 14
Location:2390345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623300 NCP1,NCPR1,NCR1 NADPH--cytochrome P450 reductase-related protein; (1 of 1) 4.1.3.44 - tRNA 4-demethylwyosine synthase (AdoMet-dependent) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGACAGCCCTCGGGCGTGCAGGCGGCCCACCAGCGCGTTTATCTCGGG
Internal bar code:TAACAGTTCCTAACCCGTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGTGTGTTCTGCTGGC
Suggested primer 2:TCCCCTCCCTCATCAGGAAG