Insertion junction: CLIP2.050875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050875
Chromosome:chromosome 12
Location:2929300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502450 ELG8 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGCCAGCTCCCAGCAGCCGTTGCCAAAACACCCATGCCAGGCCCCTG
Internal bar code:CTTGGCTGGTGGCGGGTAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2211
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCGTACATGCAAGAATG
Suggested primer 2:TCCCAATCAGGATTGCCACC