Insertion junction: CLIP2.050877_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050877
Chromosome:chromosome 6
Location:6344510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293051 AMT1C,AMT3 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCATACCTTGTGTTTGGACCGATGCAATTAGGCTTTGCGCTGGTGA
Internal bar code:TTGGTTCTGAACTGTCGGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGGCTGTGACTAGCTA
Suggested primer 2:TTCCCGTAATATGACGCCGG