Insertion junction: CLIP2.050877_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050877
Chromosome:chromosome 13
Location:2446691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGACGGGGGGGGGTGTTTGGGCGTTGCTGCTGCTATGGTTTCCACTC
Internal bar code:TATTACGTGGTAGACAGACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:964
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGATGCAGGACAGGTGGG
Suggested primer 2:CCACCCACCCACCTTAATCC