Insertion junction: CLIP2.050885_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050885
Chromosome:chromosome 17
Location:3771383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726700 (1 of 4) 6.2.1.1 - Acetate--CoA ligase / Acyl-activating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTTTCTTCCGCAACCCCATCAGGGCGAGCCCAAGGCCATCCCCTGGAC
Internal bar code:CCAGGGGCCTGGAGTACGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:381
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAGTGCGACAGGTTAC
Suggested primer 2:CGCCCATTACCATGCCAATG