Insertion junction: CLIP2.050887_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050887
Chromosome:chromosome 6
Location:2601179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00026443

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGGGACGCCACGGCGCAGGCAGGCAGTGACGTTGCCGGGAGTCACGG
Internal bar code:GACAGGGAACTAGAAGAGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2677
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCAGGTTGGCAAAGTC
Suggested primer 2:GCCCTGTTCTGCATCTCAGT