Insertion junction: CLIP2.050908_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050908
Chromosome:chromosome 11
Location:800979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467635 MOT22 Predicted protein; (1 of 1) PF00339 - Arrestin (or S-antigen), N-terminal domain (Arrestin_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTTAGGCCCAGTCAGGCCGCCGTGTGGTCCTCCCAACGGTCACCCAA
Internal bar code:GTTGCGATTCTATCGGAGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:651
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTAACAGTGCCACTCAG
Suggested primer 2:GACAGTGTGAAAACCGGCAC