Insertion junction: CLIP2.050926_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050926
Chromosome:chromosome 1
Location:3742650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024400 TRS85 Component of TRAPP complex, TRS85-like; (1 of 1) PF12739 - ER-Golgi trafficking TRAPP I complex 85 kDa subunit (TRAPPC-Trs85) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATAACCTGCACACGCACGCCAACACACCTGCAAAGCTCGCCAGAGTAC
Internal bar code:GCAAGCGCAAGCTTCCAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:902
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTCCTACGCCTTCACT
Suggested primer 2:ACCGATACACAACATGCCGT