Insertion junction: CLIP2.050930_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050930
Chromosome:chromosome 13
Location:967314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568200 AXL1 Arabinose chain extension enzyme like protein 1; (1 of 3) PTHR10994//PTHR10994:SF69 - RETICULON // PROLINE-RICH PROTEIN 18 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCCACACACACGCTACACGCCTACACGCACACGCATGCACGCCTACA
Internal bar code:CATAGGGGCGTTGCTTGAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1203
LEAP-Seq percent confirming:50.8197
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGCTGCACCCACACTTC
Suggested primer 2:GCAGAGGCTGTACGAGGTAC