Insertion junction: CLIP2.050944_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050944
Chromosome:chromosome 8
Location:1227096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363350 (1 of 2) IPR003034//IPR009061 - SAP domain // Putative DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAAACCACGTAACGCCCACAAGCGGTTGTGCTAAGGTCCCAGTATGC
Internal bar code:TCTTTACGCGTGCGCACATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1479
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGCACAGATGGAGGTT
Suggested primer 2:CGTATACGCACCCGATTCCA