Insertion junction: CLIP2.050947_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050947
Chromosome:chromosome 16
Location:6762780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672500 (1 of 1) PTHR28573//PTHR28573:SF1 - FAMILY NOT NAMED // SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACACCCTCCTTGTTCTACGGATTTGGGGAAAGGAGGGCGGCCAGGAAA
Internal bar code:CCAGTGACGACACGCGGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2022
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGAAGGAGATCCAGGT
Suggested primer 2:CCTGAACCCTGTCCCATCAC