Insertion junction: CLIP2.050957_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050957
Chromosome:chromosome 3
Location:7680962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203900 (1 of 14) IPR013785 - Aldolase-type TIM barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGTGTGAGAGTCATCTCCGCACGTAATTCGTCCACTGCAAACAACT
Internal bar code:ATGGTTTGGGCGTAGTTCTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2819
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACAGGGGCAAAGAAAC
Suggested primer 2:AATGATGTCCGCAACCTCGT