Insertion junction: CLIP2.050957_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050957
Chromosome:chromosome 3
Location:7680968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203900 (1 of 14) IPR013785 - Aldolase-type TIM barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCACTCCTGGCACAGGCCTTTCGCCACCTGCTCTCCTGAGTCGCTAC
Internal bar code:ATGGTTTGGGCGTAGTTCTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1608
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AATGATGTCCGCAACCTCGT
Suggested primer 2:CAGCACAGGGGCAAAGAAAC