Insertion junction: CLIP2.050958_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050958
Chromosome:chromosome 10
Location:5409643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457297 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGACGATGCAAAAGGGTGAGGTGCTGCCGGCGACTGCGGCTCCGCACA
Internal bar code:TCGGGAGTAACTCTATGCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3991
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGTATTGCGATGCACAG
Suggested primer 2:CGTATACGCACGAGCAGTCT