Insertion junction: CLIP2.050960_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050960
Chromosome:chromosome 7
Location:4889106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346418 (1 of 2) PTHR13271//PTHR13271:SF30 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCCGCCCGCAGCGAGATGACGGAGGTGTCCCACGTGATGCCTGCCT
Internal bar code:AGGGAATGTGGTATGTCTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2180
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGTACAAGGCGCGAAA
Suggested primer 2:ATGGGAGGGAGAAGGAGGAC