Insertion junction: CLIP2.050962_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050962
Chromosome:chromosome 9
Location:2195066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395350 ASA9 Mitochondrial F1F0 ATP synthase associated protein 9 5'UTR
Cre09.g395400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCAGAGGGCTCCACCCATCCGACACCCATCTCGGCCGACTCGCTGTG
Internal bar code:TACGTTGACTATGGCGCCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3014
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCGCCCTATCCCGATTC
Suggested primer 2:AAACGTACTTGTTGTGCCGC