Insertion junction: CLIP2.050966_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050966
Chromosome:chromosome 3
Location:871757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146467 TRS31 (1 of 1) IPR007194//IPR016696//IPR024096 - Transport protein particle (TRAPP) component // TRAPP I complex, subunit 5 // NO signalling/Golgi transport ligand-binding domain; Component of TRAPP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCCCGTCAGAAGTCCATTTGCAGCTGTTTCGCATTGGCAGCGACGGA
Internal bar code:TACTTGGAAACTGGGATATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2227
LEAP-Seq percent confirming:89.2308
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATATCTCGTGGACCGGG
Suggested primer 2:CTCAGGCTGTTGACAGAGCA