Insertion junction: CLIP2.050972_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050972
Chromosome:chromosome 9
Location:4589062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCGGGGCCATCCTGCGCGTGGCGGCAGTGCTGCCACCGGGCGTGCGC
Internal bar code:AAATCTTACATTGGTTTTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3886
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGCACCCATACCATGA
Suggested primer 2:TCTTTGCACGCGTGAAACTG