Insertion junction: CLIP2.050977_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050977
Chromosome:chromosome 10
Location:3302068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443100 (1 of 1) IPR001214//IPR023220 - SET domain // Type IV secretion system, VirB5-domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGGGTCGGTCGGTGCCTGCGGTCGGGGCCGCGGGCCCGGGCAGGTG
Internal bar code:CAAGACCAATTGCTGCGAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2455
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGACACCAGCATCCA
Suggested primer 2:ATCGACGTCGCTGAATACCC