Insertion junction: CLIP2.050978_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050978
Chromosome:chromosome 1
Location:2462704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014300 HGC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCGTGTCCACACACGGTTTGGCGCCAAACCAACTATGCACCAATGCG
Internal bar code:TAAAAATTTAGCCACTGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1528
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGATAGTGGCCGTGGCG
Suggested primer 2:GCATGCAACCTCAACAAGCA