Insertion junction: CLIP2.050989_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050989
Chromosome:chromosome 13
Location:4053814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTTCTTGTGAAAGGGAGATTCAGGAAATTGGGGGATCCGAGTTGGAG
Internal bar code:CGGTCTCTCATCGATGTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:922
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGCAGCCTTCTTAGC
Suggested primer 2:AGAAGCAGGTTGGCACTACC