Insertion junction: CLIP2.050989_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050989
Chromosome:chromosome 13
Location:4053832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGACCTCTGGCAAGAAGGCCGTGAGCCGCAGCGCCAAGGCGGGCCT
Internal bar code:CGGTCTCTCATCGATGTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4272
LEAP-Seq percent confirming:94.9367
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCAGGTTGGCACTACC
Suggested primer 2:TCCTTGGCAGCCTTCTTAGC