Insertion junction: CLIP2.051002_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051002
Chromosome:chromosome 17
Location:1583718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707300 PGA3 Phospholipid/glycerol acyltransferase; (1 of 1) PTHR23063:SF1 - 1-ACYLGLYCEROPHOSPHOCHOLINE O-ACYLTRANSFERASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTTCTGGACGCGCATGTTGCTGTACGCGTTGGGGTTCTGGACCATCAA
Internal bar code:CGGAATTTAAGTTTTCAAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAATGCAGTCCTATGC
Suggested primer 2:CGCATCGTTTGGCATCGAAT