Insertion junction: CLIP2.051005_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051005
Chromosome:chromosome 17
Location:6423881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATAAGTAGTGGCTGGATGGGCATGGATGCTTTCAGTCCGCGTCTCCC
Internal bar code:TAAGGGTAAGTACACCAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2498
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCAACAACGTGTACGC
Suggested primer 2:TGAGCTAGACATCACCCCGA