Insertion junction: CLIP2.051010_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051010
Chromosome:chromosome 6
Location:3215948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276600 HTR2 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCGTGACACGCTTGGCGTGGATGGCGCACAGGTTGGTGTCCTCGAACA
Internal bar code:GTCTTATGAGGTACTTAATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2512
LEAP-Seq percent confirming:90.8397
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCCCTTTTATTGGGGT
Suggested primer 2:TCTGGCTGTGATTGAGCAGG