Insertion junction: CLIP2.051011_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051011
Chromosome:chromosome 16
Location:6824938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801996 (1 of 226) IPR012337 - Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCTTCACTAAGGTGAACCCCCTCCCCCCTCCAACCCTGCTCCACCT
Internal bar code:TTGCGGGATTCTGACGTTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTACGAGGTAGAGCACGC
Suggested primer 2:TCTTTACTACAGGGCGGGGA